[gmx-users] Can't build gromacs-4.5.3 with cmake

Keith Callenberg kmc112 at pitt.edu
Wed Dec 8 15:49:23 CET 2010


Hello gmx-users,

I am trying to build gromacs-4.5.3 with GPU support with OpenMM. I
have followed the INSTALL-GPU instructions along with the tips given
in this post: http://www.mail-archive.com/gmx-users@gromacs.org/msg34139.html

However, I am receiving the following error from cmake even without
the -DGMX_OPENMM=ON flag (and I have been making sure to rm
CMakeCache.txt and src/CMakeCache.txt):

user at host:~/apps/gromacs-4.5.3$ cmake src/
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Found assembler: /usr/bin/as
-- Loaded CMakeASM-ATTInformation - ASM-ATT support is still
experimental, please report issues
CMake Error at gmxlib/CMakeLists.txt:146 (set_target_properties):
 set_target_properties called with incorrect number of arguments.


CMake Error at gmxlib/CMakeLists.txt:148 (install):
 install TARGETS given no ARCHIVE DESTINATION for static library target
 "gmx".


CMake Error at mdlib/CMakeLists.txt:11 (set_target_properties):
 set_target_properties called with incorrect number of arguments.


CMake Error at mdlib/CMakeLists.txt:13 (install):
 install TARGETS given no ARCHIVE DESTINATION for static library target
 "md".


CMake Error at kernel/CMakeLists.txt:42 (set_target_properties):
 set_target_properties called with incorrect number of arguments.


CMake Error at kernel/CMakeLists.txt:108 (install):
 install TARGETS given no ARCHIVE DESTINATION for static library target
 "gmxpreprocess".


CMake Error at kernel/CMakeLists.txt:109 (install):
 install TARGETS given no RUNTIME DESTINATION for executable target "mdrun".


CMake Error at kernel/CMakeLists.txt:110 (install):
 install TARGETS given no RUNTIME DESTINATION for executable target
 "grompp".


CMake Error at tools/CMakeLists.txt:36 (set_target_properties):
 set_target_properties called with incorrect number of arguments.


CMake Error at tools/CMakeLists.txt:65 (install):
 install TARGETS given no ARCHIVE DESTINATION for static library target
 "gmxana".


CMake Error at tools/CMakeLists.txt:66 (install):
 install TARGETS given no RUNTIME DESTINATION for executable target
 "do_dssp".


CMake Warning (dev) in CMakeLists.txt:
 No cmake_minimum_required command is present.  A line of code such as

   cmake_minimum_required(VERSION 2.8)

 should be added at the top of the file.  The version specified may be lower
 if you wish to support older CMake versions for this project.  For more
 information run "cmake --help-policy CMP0000".
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring incomplete, errors occurred!

Here are my environment variables:
PATH=/usr/local/cuda/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
LD_LIBRARY_PATH=/usr/local/cuda/lib64:/usr/local/cuda/lib:/usr/local/openmm/lib:

The variable that seems to be empty in CMakeLists.txt is
${LIB_INSTALL_DIR}. Does anyone know what that might be caused by?

Thank you,
Keith Callenberg



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