[gmx-users] Segmentation fault in g_hbond

Erik Marklund erikm at xray.bmc.uu.se
Sat Dec 18 21:15:36 CET 2010


leila karami skrev 2010-12-18 16.52:
> Dear Erik
>
> there are several hb->per->pHist in gmx_hbond.c.
>
> please say me exactly in which part of the gmx_hbond.c file 
> if-statement should be placed?
>
>
> If I install gromacs 4.5.2 or 4.5.3, is there not this problem 
> (segmentation fault)?
>
> -- 
> Leila Karami
> Ph.D. student of Physical Chemistry
> K.N. Toosi University of Technology
> Theoretical Physical Chemistry Group
>
As I said: "There's a call to clearPshift in do_merge which causes a 
segfault". Theres only one call to clearPshift in do_merge as far as I 
can remember.

-- 
-----------------------------------------------
Erik Marklund, PhD student
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 4537        fax: +46 18 511 755
erikm at xray.bmc.uu.se    http://folding.bmc.uu.se/




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