[gmx-users] Segmentation fault in g_hbond

[Justin A. Lemkul]

Erik Marklund wrote:
> leila karami skrev 2010-12-18 16.52:
>> Dear Erik
>>
>> there are several hb->per->pHist in gmx_hbond.c.
>>
>> please say me exactly in which part of the gmx_hbond.c file 
>> if-statement should be placed?
>>
>>
>> If I install gromacs 4.5.2 or 4.5.3, is there not this problem 
>> (segmentation fault)?
>>
>> -- 
>> Leila Karami
>> Ph.D. student of Physical Chemistry
>> K.N. Toosi University of Technology
>> Theoretical Physical Chemistry Group
>>
> As I said: "There's a call to clearPshift in do_merge which causes a 
> segfault". Theres only one call to clearPshift in do_merge as far as I 
> can remember.
> 

There is, and there are no code modifications necessary if the OP simply 
upgrades to version 4.5.3, which contains the proper code already.

-Justin
-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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