[gmx-users] Hydrogen bond tutorial

[Justin A. Lemkul]

leila karami wrote:
> Dear all
>  
> I want to do Hydrogen bond analysis for my MD data (protein-dna 
> interaction).
> If anybody know the tutorial regarding that, please let me know.
> 
> Any help will highly appreciated!
> 

Start with the manual and g_hbond -h, and come back with a more focused 
question.  There isn't going to be detailed tutorials for every single task you 
can imagine, but certainly with the references provided you should be able to 
make a reasonable attempt at whatever analysis you're trying to do.  If it 
doesn't work, then post what you're doing and what you want to be doing to get 
some advice.

-Justin

> 
>  
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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