[gmx-users] Segmentation fault (11)

Ricardo O. S. Soares ross_usp at yahoo.com.br
Thu Jan 21 20:00:08 CET 2010

Hi everyone,

could anyone help me with this? I already searched the mailing archives, with no luck.

I just installed gromacs 4.0.7 in a new computer here, same as always (with mpi support), but now I get this error whem I run MDRUN with or without mpirun (openmpi):

starting mdrun 'Protein in water'
250000 steps,    500.0 ps.
step 0
[host02:21827] *** Process received signal ***
[host02:21827] Signal: Segmentation fault (11)
[host02:21827] Signal code: Address not mapped (1)
[host02:21827] Failing at address: (nil)
[host02:21827] [ 0] [0xddf410]
[host02:21827] *** End of error message ***
Segmentation fault

Any ideas?

Thank you.

 Ricardo O. S. Soares , MsC.
Group of Biological Physics - Department of Physics & Chemistry
Faculty of Pharmaceutical Sciences at Ribeirão Preto - University of São Paulo.
Av.do Café, S/N - ZIP:14040-903 - Ribeirão Preto, São Paulo,  Brazil.
Phone: +55 16 36024840.

ross_usp at yahoo.com.br,rsoares at fcfrp.usp.br

Veja quais são os assuntos do momento no Yahoo! +Buscados
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20100121/cd6585f9/attachment.html>

More information about the gromacs.org_gmx-users mailing list