[gmx-users] how to show structure results in Martini coarse-grained simulation?

[Justin A. Lemkul]

xi zhao wrote:
> Dear user:
> how to show struture or conformation in Martini coarse-grained 
> simulation, using VMD or other?
> Please give me some suggestion!
> thank you!

What kind of rendering do you want to do?  There are some scripts linked below 
to render bonds in a CG structure.

http://www.gromacs.org/Developer_Zone/Programming_Guide/VMD#VMD_and_coarse-grained_simulations

-Justin

> 
> 
> 4 
> <http://cn.webmessenger.yahoo.com/index.php?t=1&to=eWlkPXpoYW94aWl0YzIwMDI-&sig=703fa929658518b2720b087c59cd85f2dabf8844>
> 
> 
>  
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================