[gmx-users] Hydrogen Bond Residence Time

Anirban Ghosh reach.anirban.ghosh at gmail.com
Wed May 5 08:31:53 CEST 2010


How can I obtain the residence time of each hydrogen bond during a
simulation? I think the -hbn and -hbm options of g_hbond has to be used, but
how? Is there any script to extract that data? And what is the difference
between the residence time and the life time of a hydrogen bond? Any
suggestion is welcome.
Thanks a lot in advance.


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