[gmx-users] gen_vel

XAvier Periole x.periole at rug.nl
Sat May 15 10:52:04 CEST 2010



On May 15, 2010, at 10:22, shahab shariati <shahab.shariati at gmail.com>  
wrote:

> Hi gromacs users
>
> I want to simulation of pr-dna as follows:
>
> 1) energy minimization 2) equilibration 3) full md.
>
> Should I use gen_vel=yes in mdp files for both (2) and (3) steps?
In principle 3) should be the continuation of 2). So the answer is  
only in 2).
>
> Thank you so much for any help!
>
>
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