[gmx-users] Re.: genion doubt (manjula kasinathan)

[Jessé Nóbrega]

Dear manjula kasinathan


There aren't the "warning" parameter in gromacs, please remove the warning option in your mdp, if you need, add the flag -maxwarn in the grompp command,

grompp -f pr.mdp -c em.gro -p top.top -o pr.tpr -maxwarn 10

your simulation presents Lincs warnings, read the gromacs's errors page:

http://www.gromacs.org/Documentation/Errors#LINCS.2fSETTLE.2fSHAKE_warnings

good luck

Jessé



      
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