[gmx-users] separation of two strands of DNA during of simulation

[shahab shariati]

Hi gromacs users

I runing md simulation of DNA for 20 ns (5000 frame). I see trajectory
during simulation. I see in some times, two strands of DNA are seprated.
simulation now is in frame of 4600. is this state true and rational?

any help will highly appreciated!
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20100529/3453287f/attachment.html>