[gmx-users] multiple torsions for one dihedral
Mark Abraham
mark.abraham at anu.edu.au
Tue Nov 2 07:21:29 CET 2010
Yes, multiple "type 1" dihedrals for use with AMBER and CHARMM forcefields can be implemented, either as successive [dihedraltypes] of type 9 (since GROMACS 4.0, IIRC) or as multiple [dihedrals] of type 1 (since ages).
Mark
----- Original Message -----
From: Amin Arabbagheri <amin_arab at yahoo.com>
Date: Tuesday, November 2, 2010 17:06
Subject: [gmx-users] multiple torsions for one dihedral
To: gmx-users at gromacs.org
-----------------------------------------------------------
| > Hi all,
>
> I'm using AMBER99p force field in GROMACS. In the AMBER forcefield for some dihedrals, there are several values, in which n values are different.
> As an example, for C3-C3-N-C, I have
> C3-C3-N-C .50 180.0 -4
> C3-C3-N-C .15 180.0 -3
> C3-C3-N-C .53 0.0 1
>
> For the version 4, is there a convenient way to use these multiple dihedrals?
> Thanks,
> Amin
>
|
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>
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