[gmx-users] -b -e

Erik Wensink e.wensink at yahoo.com
Sun Nov 7 14:12:21 CET 2010

Hi Atila,

 You can use gmxtool trjconv to create a new trajectory file of the last 4ns. Or consider grace (obtain from the net) to modify the axis of your plot by hand.

--- On Sun, 11/7/10, atila petrosian <atila.petrosian at gmail.com> wrote:

From: atila petrosian <atila.petrosian at gmail.com>
Subject: [gmx-users] -b -e
To: gmx-users at gromacs.org
Date: Sunday, November 7, 2010, 2:01 PM

Dear gromacs users
my simulation time is 10 ns (10000 ps), but, I want to use last 4ns for analysis. 
for example, if I use g_rms -b 6000 -e 10000 -o rmsd.xvg, in xvg output file, rmsd plotted versus time (from 6000 to 10000 ps in horizontal axis). while I want horizontal axis be from 0 to 4000 ps.
how to do it?

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