[gmx-users] Reg: Installing gromacs in cygwin

Mark Abraham mark.abraham at anu.edu.au
Mon Oct 11 07:50:00 CEST 2010

----- Original Message -----
From: vinothkumar mohanakrishnan <kmvinoth at gmail.com>
Date: Monday, October 11, 2010 16:29
Subject: [gmx-users] Reg: Installing gromacs in cygwin
To: Discussion list for GROMACS users <gmx-users at gromacs.org>

> Hi >   > I am installing gromacs-4.0.5

That version's a few years old, and unless you need scientific continuity, you should install the latest version.

> in windows using cygwin and i followed th procedure described in the link http://lists.gromacs.org/pipermail/gmx-users/2009-September/044792.html. there is no problem with fftw-3.2.2 installation. while insatlling gromacs at first i gave the command (as said in the link above)  >   > ./configure --prefix=/cygdrive/c/Packages/Gromacs --enable-shared
>                  LDFLAGS='-L/cygdrive/c/Packages/fftw/lib/'
>                  CPPFLAGS='-I/cygdrive/c/Packages/fftw/include/'  >   > and then i gave the command make and i am getting the error message as one given below. any help is highly appreciated. >   > collect2: Id returned 1 exit status > make[3]: *** [grompp.exe] Error 1 > make[3]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src/kernel' > make[2]: *** [all-directory] Error 1 > make[2]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src' > make[1]: *** [all] Error 2 > make[1]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src' > make: *** [all-recursive] Error 1

What's above that? Is this a recent cygwin installation?


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