[gmx-users] Reg: Installing gromacs in cygwin

[vinothkumar mohanakrishnan]

Hi mark

I have installed cygwin 1.7.7(the latest version) and i want to install only
gromacs 4.0.5 (for scientific continuity).any help is highly appreciated.

Regards
Vinoth

On Mon, Oct 11, 2010 at 11:20 AM, Mark Abraham <mark.abraham at anu.edu.au>wrote:

>
>
> ----- Original Message -----
> From: vinothkumar mohanakrishnan <kmvinoth at gmail.com>
> Date: Monday, October 11, 2010 16:29
> Subject: [gmx-users] Reg: Installing gromacs in cygwin
> To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>
> > Hi
> >
>  > I am installing gromacs-4.0.5
>
> That version's a few years old, and unless you need scientific continuity,
> you should install the latest version.
>
>
> > in windows using cygwin and i followed th procedure described in the link
> http://lists.gromacs.org/pipermail/gmx-users/2009-September/044792.html.
> there is no problem with fftw-3.2.2 installation. while insatlling gromacs
> at first i gave the command (as said in the link above)
>   >
> > ./configure --prefix=/cygdrive/c/Packages/Gromacs --enable-shared
> >                  LDFLAGS='-L/cygdrive/c/Packages/fftw/lib/'
> >                  CPPFLAGS='-I/cygdrive/c/Packages/fftw/include/'
> >
> > and then i gave the command *make* and i am getting the error message as
> one given below. any help is highly appreciated.
> >
> > collect2: Id returned 1 exit status
> > make[3]: *** [grompp.exe] Error 1
> > make[3]: Leaving directory
> '/cygdrive/c/Packages/gromacs-4.0.5/src/kernel'
> > make[2]: *** [all-directory] Error 1
> > make[2]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src'
> > make[1]: *** [all] Error 2
> > make[1]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src'
>   > make: *** [all-recursive] Error 1
>
> What's above that? Is this a recent cygwin installation?
>
> Mark
>
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