[gmx-users] Reg: Installing gromacs in cygwin

Mark Abraham mark.abraham at anu.edu.au
Mon Oct 11 08:33:26 CEST 2010



----- Original Message -----
From: vinothkumar mohanakrishnan <kmvinoth at gmail.com>
Date: Monday, October 11, 2010 17:12
Subject: Re: [gmx-users] Reg: Installing gromacs in cygwin
To: Discussion list for GROMACS users <gmx-users at gromacs.org>

> Hi mark  >   > I have installed cygwin 1.7.7(the latest version) and i want to install only gromacs 4.0.5 (for scientific continuity).any help is highly appreciated.

OK, so like I asked last time, what's above the message you quoted?

Mark

 >   > Regards > Vinoth
> 
 > On Mon, Oct 11, 2010 at 11:20 AM, Mark Abraham <mark.abraham at anu.edu.au> wrote:
  > 
> 
> ----- Original Message -----
> From: vinothkumar mohanakrishnan <kmvinoth at gmail.com>
> Date: Monday, October 11, 2010 16:29
> Subject: [gmx-users] Reg: Installing gromacs in cygwin
>  To: Discussion list for GROMACS users <gmx-users at gromacs.org>
> 
 > > Hi > >    > > I am installing gromacs-4.0.5
> 
> That version's a few years old, and unless you need scientific continuity, you should install the latest version.    > 
> 
> > in windows using cygwin and i followed th procedure described in the link http://lists.gromacs.org/pipermail/gmx-users/2009-September/044792.html. there is no problem with fftw-3.2.2 installation. while insatlling gromacs at first i gave the command (as said in the link above)     > >   > > ./configure --prefix=/cygdrive/c/Packages/Gromacs --enable-shared
> >                  LDFLAGS='-L/cygdrive/c/Packages/fftw/lib/'
 > >                  CPPFLAGS='-I/cygdrive/c/Packages/fftw/include/' > >   > > and then i gave the command make and i am getting the error message as one given below. any help is highly appreciated.  > >   > > collect2: Id returned 1 exit status > > make[3]: *** [grompp.exe] Error 1 > > make[3]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src/kernel' > > make[2]: *** [all-directory] Error 1 > > make[2]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src' > > make[1]: *** [all] Error 2 > > make[1]: Leaving directory '/cygdrive/c/Packages/gromacs-4.0.5/src'    > > make: *** [all-recursive] Error 1
> 
> What's above that? Is this a recent cygwin installation?
 > 
> Mark
> 
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