[gmx-users] Gromacs benchmarking results
viveksharma.iitb at gmail.com
Mon Oct 11 12:10:23 CEST 2010
I have some gromacs benchmarking results to share.
I have tried the lysozyme example distributed in the benchmarking
suite "gmxbench-3.0.tar.gz". I have used the case provided in d.lzm/
with pme.mdp parameter file.
Following is the performance (in ns/day) I got with gromacs-4.0.5 on
my cluster with different number of processors. I have tried different
npme for each run and reporting here the best one.
#processors #npme Performance ( ns/day)
24 8 44.698
48 16 75.262
72 24 86.835
84 20 102.249
96 16 97.079
120 40 97.738
144 64 93.204
156 76 89.534
I am looking for some more benchmarks on the same example set, to
compare these results. Please, share if somebody has tried it.
Expecting some helpful comments and suggestions to improve the
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