[gmx-users] simulation of a protein including calcium ion
ramezanpour.mohsen at gmail.com
Sat Oct 16 10:12:34 CEST 2010
I think it is a typical ligand in your pdb file.what do you think?
if it be a ligand you can use PRODRG server to make topology file for your
ligand and you must edit other files.
please read this article: "GROMACS Tutorial for Drug – Enzyme Complex"
On Sat, Oct 16, 2010 at 11:32 AM, mohsen ramezanpour <
ramezanpour.mohsen at gmail.com> wrote:
> I think it is a typical ligand in your pdb file.what do you think?
> if it be a ligand you can use PRODRG server to make topology file for your
> ligand and you must edit other files.
> please read the attached article.
> On Sat, Oct 16, 2010 at 11:04 AM, leila karami <karami.leila1 at gmail.com>wrote:
>> Hi gromacs users
>> I want to study simulation of a protein including calcium ion. Can I use
>> gromacs force fields?
>> any help will highly appreciated.
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