[gmx-users] simulation of a protein including calcium ion

leila karami karami.leila1 at gmail.com
Sat Oct 16 10:30:44 CEST 2010

Dear mohsen ramezanpour* *

yes. calcium is a typical ligand in my pdb file.I used PRODRG server
to make topology file but

ERRDRG> Too many atoms in this molecule (should be <=300).
PRODRG> Program terminated unsuccessfully, sorry!
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