[gmx-users] Fwd: -pbc nojump

leila karami karami.leila1 at gmail.com
Wed Oct 27 11:57:58 CEST 2010

Dear Tsjerk

I did what you said:

1.       trjconv -f a.xtc -s a.tpr -o 1.xtc -pbc nojump  (system for output)

2.       trjconv -f a.xtc -s a.tpr -o 2.xtc -pbc mol –center  (pr/dna
for centering, system for output)

Now, I need new trajectory file for analysis. How I obtain new
trajectory file from these two trajectories (1.xtc and 2.xtc)
during simulation time?

thanks for your help.
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