[gmx-users] Need help!!!

#ZHAO LINA# ZHAO0139 at e.ntu.edu.sg
Thu Sep 2 15:08:14 CEST 2010

Make sure your gromacs is the latest version.
If not, update and try again.

From: gmx-users-bounces at gromacs.org [gmx-users-bounces at gromacs.org] on behalf of praba vathy [sumipraba2003 at gmail.com]
Sent: Thursday, September 02, 2010 9:06 PM
To: gmx-users at gromacs.org
Subject: [gmx-users] Need help!!!


I am using simulation for a membrane protein.
So i have downloaded the dppc.pdb along with it's topology files.
I have used the following steps for the simulation (Based on the link:

We have used the commands and steps as described in the above link.
But we have got a fatal error (Atom type C not found) while running this command,

grompp -f mini.mdp -c dppc128.gro -p topol_dppc.top -o em.tp<http://em.tp>

I cant sort out this problem.
Please anybody help me to sort out this problem.
Awaiting for your valuable replies.

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