[gmx-users] Need help!!!

praba vathy sumipraba2003 at gmail.com
Thu Sep 2 15:06:21 CEST 2010


I am using simulation for a membrane protein.
So i have downloaded the dppc.pdb along with it's topology files.
I have used the following steps for the simulation (Based on the link:

We have used the commands and steps as described in the above link.
But we have got a fatal error (Atom type C not found) while running this

grompp -f mini.mdp -c dppc128.gro -p topol_dppc.top -o em.tp

I cant sort out this problem.
Please anybody help me to sort out this problem.
Awaiting for your valuable replies.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20100902/98fda7b2/attachment.html>

More information about the gromacs.org_gmx-users mailing list