[gmx-users] error on compilation on BlueGene/P

[Mark Abraham]

----- Original Message -----
From: Fabio Affinito <f.affinito at cineca.it>
Date: Tuesday, September 21, 2010 18:51
Subject: Re: [gmx-users] error on compilation on BlueGene/P
To: Discussion list for GROMACS users <gmx-users at gromacs.org>

> Thank you, Mark and Berk!
> your suggestion was helpful and I successfully compiled on the 
> frontend.Now I have a problem when I compile on the compute nodes.
> Configure was fine with these parameters:
> 
> ../configure --prefix=/bgp/userinternal/cin0644a/gromacs \
>               --host=ppc --build=ppc64 --enable-ppc-sqrt=1 \
>               --disable-ppc-altivec \
>               --enable-bluegene --enable-fortran --enable-mpi \
>               --with-fft=fftw3 \
>               --program-suffix=_mpi_bg \
>               --without-x \
>              CC=mpixlc_r \
>              CFLAGS="-O3 -qarch=450d -qtune=450" \
>              MPICC=mpixlc_r CXX=mpixlC_r \
>              CXXFLAGS="-O3 -qarch=450d -qtune=450" \
>              CPPFLAGS="-I/bgp/userinternal/cin0644a/fftwlibs/include" \
>              F77=mpixlf77_r FFLAGS="-O3 -qarch=auto -qtune=auto" \
>              LDFLAGS="-L/bgp/userinternal/cin0644a/fftwlibs/lib" \
>              LIBS="-lmass"
> 
> But when I compile using "make mdrun" the compilation stops in 
> this way.
> 
> creating libgmxpreprocess_mpi.la
> (cd .libs && rm -f libgmxpreprocess_mpi.la && ln -s
> ../libgmxpreprocess_mpi.la libgmxpreprocess_mpi.la)
> make[1]: *** No rule to make target `../mdlib/libmd_mpi.la', 
> needed by
> `mdrun'.  Stop.
> make[1]: Leaving directory 
> `/bgp/userinternal/cin0644a/gmx/bgp/src/kernel'
> Any suggestion? Thanks!


Normally that would be symptomatic of an earlier error in make (or maybe configure). Please check carefully.

Mark

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