[gmx-users] error on compilation on BlueGene/P

[Fabio Affinito]

Like for the frontend, the --enable-fortran is the problem.
Maybe it could be useful to update the instruction page :)

Fabio


On 09/21/2010 10:54 AM, Mark Abraham wrote:
> 
> 
> ----- Original Message -----
> From: Fabio Affinito <f.affinito at cineca.it>
> Date: Tuesday, September 21, 2010 18:51
> Subject: Re: [gmx-users] error on compilation on BlueGene/P
> To: Discussion list for GROMACS users <gmx-users at gromacs.org>
> 
>> Thank you, Mark and Berk!
>> your suggestion was helpful and I successfully compiled on the
>> frontend.Now I have a problem when I compile on the compute nodes.
>> Configure was fine with these parameters:
>>
>> ../configure --prefix=/bgp/userinternal/cin0644a/gromacs \
>>               --host=ppc --build=ppc64 --enable-ppc-sqrt=1 \
>>               --disable-ppc-altivec \
>>               --enable-bluegene --enable-fortran --enable-mpi \
>>               --with-fft=fftw3 \
>>               --program-suffix=_mpi_bg \
>>               --without-x \
>>              CC=mpixlc_r \
>>              CFLAGS="-O3 -qarch=450d -qtune=450" \
>>              MPICC=mpixlc_r CXX=mpixlC_r \
>>              CXXFLAGS="-O3 -qarch=450d -qtune=450" \
>>              CPPFLAGS="-I/bgp/userinternal/cin0644a/fftwlibs/include" \
>>              F77=mpixlf77_r FFLAGS="-O3 -qarch=auto -qtune=auto" \
>>              LDFLAGS="-L/bgp/userinternal/cin0644a/fftwlibs/lib" \
>>              LIBS="-lmass"
>>
>> But when I compile using "make mdrun" the compilation stops in
>> this way.
>>
>> creating libgmxpreprocess_mpi.la
>> (cd .libs && rm -f libgmxpreprocess_mpi.la && ln -s
>> ../libgmxpreprocess_mpi.la libgmxpreprocess_mpi.la)
>> make[1]: *** No rule to make target `../mdlib/libmd_mpi.la',
>> needed by
>> `mdrun'.  Stop.
>> make[1]: Leaving directory
>> `/bgp/userinternal/cin0644a/gmx/bgp/src/kernel'
>> Any suggestion? Thanks!
> 
> 
> Normally that would be symptomatic of an earlier error in make (or maybe
> configure). Please check carefully.
> 
> Mark
> 


-- 
*********************************************
Fabio Affinito, PhD
CINECA
InterUniversity Computer Center
Via Magnanelli, 6/3
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e-mail: f.affinito at cineca.it