[gmx-users] Installtion of gromacs-4.5.3

[Roland Schulz]

Hi,

this question has been answered often. Please check the archive before
posting.

Roland

On Thu, Mar 31, 2011 at 8:01 PM, parichita parichita <
parichitamajumdar at yahoo.co.in> wrote:

> Hi...
> I am try to istalling gromacs -4.5.3 on AMD phenom II.
> I am following the installtions protocols, 1 St i have installed the
> fftw3.2.2,
> ./configure --enable-threads --enables-floats --enables-sse
> make
> make install
>
> then I am doing the "cmake".
> cd gromacs-4.5.3
> mkdir exec
> cd exec
> cmake ../
>
> After cmake the make -j 6 gives me an error
>
> "Linking C shared library libmd.so
> /usr/bin/ld: /usr/local/lib/libfftw3f.a(tensor.o): relocation R_X86_64_32
> against `.rodata.str1.1' can not be used when making a shared object;
> recompile with -fPIC
> /usr/local/lib/libfftw3f.a: could not read symbols: Bad value
> collect2: ld returned 1 exit status
> make[2]: *** [src/mdlib/libmd.so.6] Error 1
> make[1]: *** [src/mdlib/CMakeFiles/md.dir/all] Error 2
> make: *** [all] Error 2"
>
> please suggest me what I should do next...
>
> with regards
>
>
> Parichita Mazumder
> Research Fellow
> C/O Dr. Chaitali Mukhopadhayay
> Department of Chemistry
> University of Calcutta
> 92,A P C Road
> Kolkata-700009
> India.
>
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