[gmx-users] Re: Trajectory visualization

Mark Abraham Mark.Abraham at anu.edu.au
Fri Apr 15 07:06:40 CEST 2011

On 15/04/2011 2:49 PM, bharat gupta wrote:
> Hi,
> I have done a simulation of 10ns but while viewing the trajectory in 
> VMD I am getting some problems. After loading the .gro and .xtc file 
> VMD stops working .. I used trjconv to compress the file but VMD 
> doesnot read frames from tat file... How can I visualize the 
> trajectories??

How do you mean "does not read frames from that file"? Can you read an 
.xtc of one frame?

Maybe VMD is running out of memory. Use trjconv to reduce the number of 
frames and try again.


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