[gmx-users] pdb2gmx segmentation fault

Mark Abraham Mark.Abraham at anu.edu.au
Wed Apr 20 04:30:04 CEST 2011

On 4/20/2011 7:38 AM, Ragothaman Yennamalli wrote:
> Hi,
> I have installed the latest version of gromacs 4.5.4 and the 
> installation went fine. When I run pdb2gmx I get Segmentation fault 
> even before I could select the force field options. I tried with 
> different pdb files and I get seg fault without any other error messages.
> The command is: pdb2gmx -f new.pdb -o conf.gro -p topol.top

Probably, no other GROMACS command works either, because of some shared 
library issue related to your new installation.


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