[gmx-users] VMD_PLUGIN_PATH

[PAUL NEWMAN]

Hi Gromacs Users,

I am using the gromacs analysing tools to analyze my DCD file produced by
NAMD. I set up the VMD_PLUGIN_PATH before running however I got the error
that the VMD_PLUGIN_PATH was not set up. Can anyone give me a hand? Please
see below the details. Thanks for the help

export VMD_PLUGIN_PATH=/home/pet/vmd/1.9/plugins/molfile

g_gyrate_d -f protein.dcd -s ../IN/protein.pdb

############################################

The file format of protein.dcd is not a known trajectory format to GROMACS.
Please make sure that the file is a trajectory!
GROMACS will now assume it to be a trajectory and will try to open it using
the VMD plug-ins.
This will only work in case the VMD plugins are found and it is a trajectory
format supported by VMD.

No VMD Plugins found
Set the environment variable VMD_PLUGIN_PATH to the molfile folder within
the
VMD installation.
The architecture (e.g. 32bit versus 64bit) of Gromacs and VMD has to match.

-------------------------------------------------------
Program g_gyrate_d, VERSION 4.5.3
Source code file: trxio.c, line: 867

Fatal error:
Not supported in read_first_frame: protein.dcd
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
-------------------------------------------------------

"Lets Kill the Fucking Band"  (Tom Savini - From Dusk til Dawn)

############################################

-- 
Cheers,

Paul
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110809/ad843715/attachment.html>