[gmx-users] compile template.c
Park, Jae Hyun nmn
parkj at ornl.gov
Thu Aug 11 23:48:17 CEST 2011
Dear GMX users,
Now, I am trying to write my own gromacs analysis code with gromacs 4.5.3.
As a first test, when I run "make" in the directory of "template" I got the following message:
------------------------------
cc -O3 -fomit-frame-pointer -finline-functions -Wall -Wno-unused -msse2 -funroll-all-loops -std=gnu99 -pthread -I./include -I/usr/include/libxml2 -I/home/h1y/gromacs-4.5.3s/include -I/home/h1y/fftw3s/include -c -o work.o work.c
cc -L/home/h1y/gromacs-4.5.3s/lib -L/home/h1y/fftw3s/lib -o work work.o -lmd -lgmx -lfftw3f -lxml2 -lnsl -lm
/home/h1y/gromacs-4.5.3s/lib/libgmx.a(vmddlopen.o)(.text+0x6): In function `vmddlopen':
: undefined reference to `dlopen'
/home/h1y/gromacs-4.5.3s/lib/libgmx.a(vmddlopen.o)(.text+0x11): In function `vmddlerror':
: undefined reference to `dlerror'
/home/h1y/gromacs-4.5.3s/lib/libgmx.a(vmddlopen.o)(.text+0x21): In function `vmddlsym':
: undefined reference to `dlsym'
/home/h1y/gromacs-4.5.3s/lib/libgmx.a(vmddlopen.o)(.text+0x31): In function `vmddlclose':
: undefined reference to `dlclose'
collect2: ld returned 1 exit status
make: *** [work] Error 1
I would deeply appreciate if any help why I got those erros and how to figure out.
Best regards,
Jae H. Park
===================
Jae Hyun Park, Ph.D.
Physics Division
Oak Ridge National Laboratory
P.O. Box 2008, MS-6372
Oak Ridge, TN 37831
Phone (865) 241-1482
E-mail parkj at ornl.gov
More information about the gromacs.org_gmx-users
mailing list