[gmx-users] which charge is used in gromacs program
    GZ Zhang 
    zgz215 at gmail.com
       
    Wed Aug 31 23:18:44 CEST 2011
    
    
  
Hi, ALL
      I have a question about the charge defined in the topology file.
      It seems to me that the charge for each atom apprears twice in
different sections of the topology files.
------------------------------------------------------------------------------
      One is
[ atomtypes ]
;name     mass      charge   ptype   c6            c12
      The other is
[ atoms ]
; id    at type res nr  residu name at name cg nr   charge
------------------------------------------------------------------------------
       And the charge number in [ atomtypes ] are always 0.0.
       Which one is actually read by gromacs program ?
       Thanks,
        Guozhen Zhang
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110831/5be277f1/attachment.html>
    
    
More information about the gromacs.org_gmx-users
mailing list