[gmx-users] which charge is used in gromacs program
GZ Zhang
zgz215 at gmail.com
Wed Aug 31 23:18:44 CEST 2011
Hi, ALL
I have a question about the charge defined in the topology file.
It seems to me that the charge for each atom apprears twice in
different sections of the topology files.
------------------------------------------------------------------------------
One is
[ atomtypes ]
;name mass charge ptype c6 c12
The other is
[ atoms ]
; id at type res nr residu name at name cg nr charge
------------------------------------------------------------------------------
And the charge number in [ atomtypes ] are always 0.0.
Which one is actually read by gromacs program ?
Thanks,
Guozhen Zhang
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