[gmx-users] Re: Looking for potential phosphate binding sites

[Justin A. Lemkul]

bharat gupta wrote:
> Hi,
> 
> Hi,
> 
> I have done a simulation of 10ns with my proteins and 0.5 M phosphate 
> ion. Now I want to know where does the phosphate ion bind on the protein 
> surface or distribution of phosphate ions on protein surface ?? .. can 
> help me finding out this ....
> 

Have you watched the trajectory to see what happens?

-Justin

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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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