[gmx-users] Error Messages

simon sham ssham44 at yahoo.com
Sat Feb 5 00:11:22 CET 2011


Hi,
I  run GROMACS in parallel mode.
The first two jobs that I submitted are still running. However, when I tried to 
submit the third job, and stopped for the following reason:

Fatal error:
There is no domain decomposition for 10 nodes that is compatible with the given box and a minimum cell size of 1.025 nm
Change the number of nodes or mdrun option -rcon or -dds or your LINCS settings
Look in the log file for details on the domain decomposition

What does the error message mean?

Thanks for your help.

Best,

Simon Sham




      
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110204/474e0da7/attachment.html>


More information about the gromacs.org_gmx-users mailing list