[gmx-users] Output of Gromacs Demo

majid hasan pu_majidhasan at yahoo.com
Sun Feb 13 18:28:10 CET 2011


I have attached the output of demo, and another Okay, I just ran the demo and 
kept pressing enter whenever it asked me. Demo ran the pdb2gmx first, and here 
is what I got.  

You seem to have the DISPLAY variable is set, so we will pop up a window with 
the output of the pdb2gmx program
Press <enter>
Starting pdb2gmx
[1] 28221
output.pdb2gmx: Permission denied
pdb2gmx finished
Press <enter>################################################################### 
[1]    Done                          xterm -title pdb2gmx -sb -e tail +0f

Then it ran genbox, gompp, and mdrun in the end (I am not totally sure of it as 
I forgot the whole list of programs, if you need complete list, let me know, and 
I'll post it).
I got similar output after every program. I also ran the files from 
"tutor/water" folder, but I got the "Permission denied" message.  


 
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