[gmx-users] inconsistent energies
Vlad Isaev
vlad.isaev.512 at gmail.com
Fri Jan 7 14:10:37 CET 2011
Hi,
I want to calculate the energy of a peptide. No minimization, or md, just
the energy at 0 K. I use this input:
integrator = steep
nsteps = 0
nstenergy = 1
nstlist = 0
ns_type = simple
pbc = no
rlist = 0
rcoulomb = 0
rvdw = 0
I get:
Potential Energy = -1.1744482e+02
Changing steep to cg changes the potential energy even though nsteps=0:
Potential Energy = -1.2410449e+02
The corresponding energy from AMBER10 is : -1.20172848e+02 (conversion
factor 4.184).
Any ideas why these are so different?
Many thanks,
Vlad
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