[gmx-users] Re: Problem in Disulfide Bond

Oliver Grant olivercgrant at gmail.com
Thu Jan 20 14:21:46 CET 2011


In the pdb, before pdb2gmx, rename the CYS residues involved in the S-S
bonds as CYS2.
If you don't know this then you need to read everything on this page about
using the amberports:
http://ffamber.cnsm.csulb.edu/
As you may have other issues with HIS and LYS residues.

Oliver
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