[gmx-users] luck

[Mr Bernard Ramos]

yup, i typed g_luck and it worked. the error that shows is
 
----------------------------------------------------------
File input/output error:
filename.pdb
For more information, visit ............ 
---------------------------------------------------------- 

--- On Mon, 1/31/11, Justin A. Lemkul <jalemkul at vt.edu> wrote:


From: Justin A. Lemkul <jalemkul at vt.edu>
Subject: Re: [gmx-users] luck
To: "Discussion list for GROMACS users" <gmx-users at gromacs.org>
Date: Monday, January 31, 2011, 12:11 PM




Mr Bernard Ramos wrote:
> Hi everyone!
>  I have two questions.
>  1. after I installed gromacs 4.5.3 and "which mdrun" was able to give the correct path, I was not able to run "luck". Instead, "luck" gives an error "command not found". Is this ok? What went wrong? Do I need to install again gromacs?
>  

The program is now called g_luck.

> 2. I tried doing "pdb2gmx". The error points the structure file "*.pdb" as the error. Does this in dicate that the program was not installed properly or there is an error with the pdb file.
>  

If the program has given you a fatal error, then the program is correctly installed and working.  It is your input that is somehow wrong.  Without the actual error message, it's impossible to say what's wrong.

-Justin

>  Thanks 
> 

-- ========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================
-- gmx-users mailing list    gmx-users at gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-request at gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists



      
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110130/19d1cb6b/attachment.html>