[gmx-users] reg g_morph

vidhya sankar scvsankar_agr at yahoo.com
Sat Jul 9 15:34:59 CEST 2011

Dear justin,
                   Thank you for your previous patient reply
When i use  trjconv tool using -b & -e option i have got the number of intermediate structures. for the selected time interval 
 i have used the  pdb of first and last (obtained throug trjconv)  in g_morph tools to get linearly interpolated structure . there also i have got 23 different linearly interpolated structure  can i compare these two set of pdb (obtained through trjconv and g_morph tools) .  
will the time factor  match ?  .because  g_morph shows time factor according to -ninterm flags which is actually different from actual .trr files obtained through Dynamics. is it possiblie to compare.
also g_morph tool does not take ant time as input. .but .xvg file (output) shows time factor. as one of variable
I am eagerly expecting your reply.
Thanks in advance
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