July 2011 Archives by author

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Starting: Fri Jul 1 01:45:54 CEST 2011
Ending: Sun Jul 31 18:12:44 CEST 2011
Messages: 762

[gmx-users] concatenate md files R.Vidya Rajendran (10PHD013)
[gmx-users] PS_PC system Du Jiangfeng (BIOCH)
[gmx-users] Regarding phenyl rings absolutely flat. HARESH AJANI
[gmx-users] rerun confusion Mark Abraham
[gmx-users] micelle clustering Mark Abraham
[gmx-users] energy_extract Mark Abraham
[gmx-users] PME energy calculation Mark Abraham
[gmx-users] N-terminus problem Mark Abraham
[gmx-users] On multi-core PCs and gromacs installation Mark Abraham
[gmx-users] final_min_step energy Mark Abraham
[gmx-users] N-terminus problem Mark Abraham
[gmx-users] GMXRC Mark Abraham
[gmx-users] On multi-core PCs and gromacs installation Mark Abraham
[gmx-users] minimization_error Mark Abraham
[gmx-users] Gromacs compilation on AMD multicore Mark Abraham
[gmx-users] Gromacs compilation on AMD multicore Mark Abraham
[gmx-users] REMD with 'bad contacts' error Mark Abraham
[gmx-users] Ion distribution around Cl fix Mark Abraham
[gmx-users] placing dihedral constraints Mark Abraham
[gmx-users] Ion distribution around Cl fix Mark Abraham
[gmx-users] Solute potential energy Mark Abraham
[gmx-users] help Mark Abraham
[gmx-users] which chain to select for MD simulation Mark Abraham
[gmx-users] xmgrace Mark Abraham
[gmx-users] gnuplot Mark Abraham
[gmx-users] want to remove H5T entry form HDB file / open terminal (P, O) for polymerization of i-motif Mark Abraham
[gmx-users] isothermal compressibility- OPLSAA at high pressure Mark Abraham
[gmx-users] BD and SD equations Mark Abraham
[gmx-users] help on mdrun Mark Abraham
[gmx-users] BD and SD equations Mark Abraham
[gmx-users] Position restraint code , where ? Mark Abraham
[gmx-users] restarting stopped mdrun Mark Abraham
[gmx-users] ERROR: Number of grid cells is zero Mark Abraham
[gmx-users] Gromacs adds much more water than tleap in Amber when solvate ? Mark Abraham
[gmx-users] calcium parameters Mark Abraham
[gmx-users] Representing bond coupling function form in a flexible water model Mark Abraham
[gmx-users] Implicit solvent crashes with PD Mark Abraham
[gmx-users] Gromacs on IBM clusters Mark Abraham
[gmx-users] Simulation runs on iMac but explodes on cluster Mark Abraham
[gmx-users] Residence time and trjorder Mark Abraham
[gmx-users] Simulation runs on iMac but explodes on cluster Mark Abraham
[gmx-users] Simulation runs on iMac but explodes on cluster Mark Abraham
[gmx-users] R: Re: rhombic dodecahedron and g_sas Mark Abraham
[gmx-users] maintained an Hbond using a distance restraint Mark Abraham
[gmx-users] Regarding phenyl rings absolutely flat. Mark Abraham
[gmx-users] Force components on ATOM XX Mark Abraham
[gmx-users] REMD with 'bad contacts' error Mark Abraham
[gmx-users] XTC I/O error in replica exchange Mark Abraham
[gmx-users] g_dist with multiple chains of molecules Mark Abraham
[gmx-users] malloc on mac Mark Abraham
[gmx-users] monte carlo simulation in gromacs Mark Abraham
[gmx-users] Re: Frame/conformation in trajectory is ignored Mark Abraham
[gmx-users] Re: Frame/conformation in trajectory is ignored Mark Abraham
[gmx-users] General Question about Simulated Annealing Mark Abraham
[gmx-users] Poisson-Boltzmann free energy in gromacs? Mark Abraham
[gmx-users] PDB2GMX :There are 0 donors and 0 acceptors Mark Abraham
[gmx-users] simulation of oligomers/monomers Mark Abraham
[gmx-users] Fluctuation from mean position in one direction Mark Abraham
[gmx-users] EM - Starting point on the hypersurface Mark Abraham
[gmx-users] Re: Eenergy Minimization Mark Abraham
[gmx-users] Conversion of the GLYCAM dihedral parameters in the GROMACS format. Mark Abraham
[gmx-users] inflate gro Mark Abraham
[gmx-users] Conversion of the GLYCAM dihedral parameters in the GROMACS format. Mark Abraham
[gmx-users] SPC/E water for Charmm ff implementation Mark Abraham
[gmx-users] multiple molecule interaction Mark Abraham
[gmx-users] SPC/E water for Charmm ff implementation Mark Abraham
[gmx-users] problems about number of frames in the edr file Mark Abraham
[gmx-users] g_cluster error in rhombic dodecahedric system Mark Abraham
[gmx-users] problems about number of frames in the edr file Mark Abraham
[gmx-users] Graphene growth simulation in gromacs Mark Abraham
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] genconf and bonded interactions Fabio Affinito
[gmx-users] protein mass center Sajad Ahrari
[gmx-users] polt of eigenvector change for a residue Sajad Ahrari
[gmx-users] Register Saeid Akbarshahi
[gmx-users] Ion distribution around Cl fix Saeid Akbarshahi
[gmx-users] Ion distribution around Cl fix Saeid Akbarshahi
[gmx-users] Ion distribution around Cl fix Saeid Akbarshahi
[gmx-users] Re: Ion distribution around Cl fix Saeid Akbarshahi
[gmx-users] Ion distribution around Cl fix Saeid Akbarshahi
[gmx-users] ignore H-bond Saeid Akbarshahi
[gmx-users] calculate potential in the box contain ions Saeid Akbarshahi
[gmx-users] calculate potential in the box contain ions Saeid Akbarshahi
[gmx-users] Input for n-butanol molecule Juliana Angeiras
[gmx-users] (no subject) Juliana Angeiras
[gmx-users] Topology for nBuOH Juliana Angeiras
Res: [gmx-users] Topology for nBuOH Juliana Angeiras
[gmx-users] Register Rossen Apostolov
[gmx-users] Fwd: inquiry Rossen Apostolov
[gmx-users] viscosity Prema Awati
[gmx-users] Segmentation fault Sayan Bagchi
[gmx-users] Weird problem Sayan Bagchi
[gmx-users] Gromacs compilation on AMD multicore Anthony Cruz Balberdi
[gmx-users] Gromacs compilation on AMD multicore Anthony Cruz Balberdi
[gmx-users] PostDoc position in molecular biomechanics of coagulation proteins Carsten Baldauf
[gmx-users] Simulation runs on iMac but explodes on cluster Emanuel Birru
[gmx-users] Re: Question : Ion distribution around Cl fix Pär Bjelkmar
[gmx-users] Re: g_msd bug Simon Butler
[gmx-users] Free Eerngy and Dispersion Correction Rainer Böckmann
[gmx-users] BD and SD equations Marcelo A. Carignano
[gmx-users] BD and SD equations Marcelo A. Carignano
[gmx-users] Using new atom types Fabian Casteblanco
[gmx-users] Re: Using new atom types Fabian Casteblanco
[gmx-users] Re: Using new atom types Fabian Casteblanco
[gmx-users] vdW cutoff Fabian Casteblanco
[gmx-users] GMXRC Mr. Joseph S. Castle
[gmx-users] Bond force constant for GROMOS Javier Cerezo
[gmx-users] Ion distribution around Cl fix Javier Cerezo
[gmx-users] regarding simulation of peptide and protein complex Javier Cerezo
[gmx-users] Re: Polarizable water model Dr. Vitaly V. Chaban
[gmx-users] Re: Polarizable water model Dr. Vitaly V. Chaban
[gmx-users] Re:g_velacc Dr. Vitaly V. Chaban
[gmx-users] About -chainsep and -ter Hsin-Lin Chiang
[gmx-users] About -chainsep and -ter Hsin-Lin Chiang
[gmx-users] About -chainsep and -ter Hsin-Lin Chiang
[gmx-users] About -chainsep and -ter Hsin-Lin Chiang
[gmx-users] About -chainsep and -ter Hsin-Lin Chiang
[gmx-users] disulfide bond, molecule type Hsin-Lin Chiang
[gmx-users] disulfide bond, molecule type Hsin-Lin Chiang
[gmx-users] disulfide bond, molecule type Hsin-Lin Chiang
[gmx-users] disulfide bond, molecule type Hsin-Lin Chiang
[gmx-users] disulfide bond, molecule type Hsin-Lin Chiang
[gmx-users] disulfide bond, molecule type Hsin-Lin Chiang
[gmx-users] Re: local pressure v4.5 issues Amit Choubey
[gmx-users] Re: local pressure v4.5 issues Amit Choubey
[gmx-users] gromacs 4.0 vs 4.5 Amit Choubey
[gmx-users] gromacs 4.0 vs 4.5 Amit Choubey
[gmx-users] Re: local pressure v4.5 issues Amit Choubey
[gmx-users] Re: local pressure v4.5 issues Amit Choubey
[gmx-users] minor trjconv issue Amit Choubey
[gmx-users] minor trjconv issue Amit Choubey
[gmx-users] Dimensionless units question Amit Choubey
[gmx-users] Dimensionless units question Amit Choubey
[gmx-users] Dimensionless units question Amit Choubey
[gmx-users] Residence time and trjorder Chandan Choudhury
[gmx-users] non-interactive script help Chandan Choudhury
[gmx-users] non-interactive script help Chandan Choudhury
[gmx-users] Residence time and trjorder Chandan Choudhury
[gmx-users] Good method to turn off electrostatics Andrew DeYoung
[gmx-users] Re: Good method to turn off electrostatics Andrew DeYoung
[gmx-users] Recommended parameters for NVE simulation of SPCE water Andrew DeYoung
[gmx-users] Questions about itp files Andrew DeYoung
[gmx-users] Improving Energy Conservation in NVE Simulation of Water Andrew DeYoung
[gmx-users] Re: Improving Energy Conservation in NVE Simulation of Water Andrew DeYoung
[gmx-users] how is dVpot/dlambda calculated Dennis Sprous, PhD
[gmx-users] use of SW.itp... Dennis Sprous, PhD
[gmx-users] Single long simulation versus multiple short ones Widya Desmarani
[gmx-users] g_velacc Nilesh Dhumal
[gmx-users] g_velacc Nilesh Dhumal
[gmx-users] g_velacc Nilesh Dhumal
[gmx-users] Re: Polarizable water model Dmitri Dubov
[gmx-users] Single long simulation versus multiple short Tom Dupree
[gmx-users] citation Elisabeth
[gmx-users] OPLSAA parameters Elisabeth
[gmx-users] Single long simulation versus multiple short Thomas Evangelidis
[gmx-users] number of windows in PMF Rebeca García Fandiño
[gmx-users] number of windows in PMF Rebeca García Fandiño
[gmx-users] number of windows in PMF Rebeca García Fandiño
[gmx-users] extending PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
FW: [gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] large error bars in PMF Rebeca García Fandiño
[gmx-users] g_cluster changing traj.trr file to traj.trr.tpr Eric Fiedler
[gmx-users] g_cluster changing traj.trr file to traj.trr.tpr Eric Fiedler
[gmx-users] gcluster- Error: too many iterations in routine JACOBI Eric Fiedler
[gmx-users] g_msd bug Dommert Florian
[gmx-users] RE: g_clustsize Ran Friedman
[gmx-users] Re: PRODRG tools Andrej Frolov
[gmx-users] (no subject) Warren Gallin
[gmx-users] make a new bond in VERSION 4.5.4 Yulian Gavrilov
[gmx-users] make a new bond in VERSION 4.5.4 Yulian Gavrilov
[gmx-users] make a new bond in VERSION 4.5.4 Yulian Gavrilov
[gmx-users] make a new bond in VERSION 4.5.4 Yulian Gavrilov
[gmx-users] g_msd bug Ivan Gladich
[gmx-users] residue SASA Diego Enry Gomes
[gmx-users] residue SASA Diego Enry Gomes
[gmx-users] Simulation runs on iMac but explodes on cluster Luke Goodsell
[gmx-users] Simulation runs on iMac but explodes on cluster Luke Goodsell
[gmx-users] Simulation runs on iMac but explodes on cluster Luke Goodsell
[gmx-users] Simulation runs on iMac but explodes on cluster Luke Goodsell
[gmx-users] Simulation runs on iMac but explodes on cluster Luke Goodsell
[gmx-users] Simulation runs on iMac but explodes on cluster Luke Goodsell
[gmx-users] Conversion of the GLYCAM dihedral parameters Oliver Grant
[gmx-users] Viscosity units Rini Gupta
[gmx-users] GPUs and umbrella sampling Jochen Hub
[gmx-users] reaction rate Olga Ivchenko
[gmx-users] inflate gro Sweta Iyer
[gmx-users] Re: inflate gro Sweta Iyer
[gmx-users] protein in membrane Sweta Iyer
[gmx-users] Residence time and trjorder Carla Jamous
[gmx-users] Residence time and trjorder Carla Jamous
[gmx-users] Residence time and trjorder Carla Jamous
[gmx-users] g_tune_pme Carla Jamous
[gmx-users] Fatal error: file type out of range (48) Carla Jamous
[gmx-users] Micelle Modeling Janowicz, Adrianna C.
[gmx-users] Micelle Modeling Janowicz, Adrianna C.
[gmx-users] Micelle Modeling Janowicz, Adrianna C.
[gmx-users] Micelle Modeling Janowicz, Adrianna C.
[gmx-users] Micelle Modeling Janowicz, Adrianna C.
[gmx-users] GROMACS+CPMD QM/MM Jacob Jantzi
[gmx-users] REMD with 'bad contacts' error Sheeba Jem
[gmx-users] REMD with 'bad contacts' error Sheeba Jem
[gmx-users] REMD with 'bad contacts' error Sheeba Jem
[gmx-users] Re: Frame/conformation in trajectory is ignored Martin Kamp Jensen
[gmx-users] Re: Frame/conformation in trajectory is ignored Martin Kamp Jensen
[gmx-users] cannot open file Taylor Kaplan
[gmx-users] g_sham and mapping structure on the free energy surface Singam Karthick
[gmx-users] maintained an Hbond using a distance restraint Itamar Kass
[gmx-users] maintained an Hbond using a distance restraint Itamar Kass
[gmx-users] maintained an Hbond using a distance restraint Itamar Kass
[gmx-users] malloc on mac Itamar Kass
[gmx-users] Simulation a labeled protein Itamar Kass
[gmx-users] ngmx Thomas Koller
[gmx-users] dodecahedron, octahedron box E. Nihal Korkmaz
[gmx-users] protein simulation w/ urea + water E. Nihal Korkmaz
[gmx-users] SPC/E water for Charmm ff implementation E. Nihal Korkmaz
[gmx-users] SPC/E water for Charmm ff implementation E. Nihal Korkmaz
[gmx-users] g_covar -xmpa E. Nihal Korkmaz
[gmx-users] Running QM/MM in parallel (ORCA/GMX) Kunze, Micha
[gmx-users] GROMACS+CPMD QM/MM Kunze, Micha
[gmx-users] g_tune_pme Carsten Kutzner
[gmx-users] Using new atom types Peter C. Lai
[gmx-users] re-equilbrating membrane protein system after g_membed and ligand addition Peter C. Lai
[gmx-users] re-equilbrating membrane protein system after g_membed and ligand addition Peter C. Lai
[gmx-users] Questions about GB parameters Per Larsson
[gmx-users] Simulation runs on iMac but explodes on cluster Per Larsson
[gmx-users] xmgrace Jussi Lehtola
[gmx-users] terminal_fixing Justin A. Lemkul
[gmx-users] 3rd neighbor Justin A. Lemkul
[gmx-users] solvent_protein interaction energy Justin A. Lemkul
[gmx-users] energygrps long-range interaction Justin A. Lemkul
[gmx-users] interaction energy Justin A. Lemkul
[gmx-users] interaction energy Justin A. Lemkul
[gmx-users] interaction energy Justin A. Lemkul
[gmx-users] how is dVpot/dlambda calculated Justin A. Lemkul
[gmx-users] energygrps long-range interaction Justin A. Lemkul
[gmx-users] Water-Mediated Hydrogen Bonds Justin A. Lemkul
[gmx-users] reg g_morph Justin A. Lemkul
[gmx-users] Water-Mediated Hydrogen Bonds Justin A. Lemkul
[gmx-users] reg g_morph Justin A. Lemkul
[gmx-users] g_mindist Justin A. Lemkul
[gmx-users] g_mindist Justin A. Lemkul
[gmx-users] Mu-X Justin A. Lemkul
[gmx-users] g_sas calculation Justin A. Lemkul
[gmx-users] reg electrostatic potential Justin A. Lemkul
[gmx-users] g_sas calculation Justin A. Lemkul
[gmx-users] g_sas calculation Justin A. Lemkul
[gmx-users] Input for n-butanol molecule Justin A. Lemkul
[gmx-users] SAS of ligands Justin A. Lemkul
[gmx-users] pmf_calculation Justin A. Lemkul
[gmx-users] pmf_calculation Justin A. Lemkul
[gmx-users] pmf_calculation Justin A. Lemkul
[gmx-users] SAS of ligands Justin A. Lemkul
[gmx-users] make a new bond in VERSION 4.5.4 Justin A. Lemkul
[gmx-users] make a new bond in VERSION 4.5.4 Justin A. Lemkul
[gmx-users] Re: g_mindist on rhombic dodecahedron system Justin A. Lemkul
[gmx-users] Hexamer problem Justin A. Lemkul
[gmx-users] Hexamer problem Justin A. Lemkul
[gmx-users] free energy calculations Justin A. Lemkul
[gmx-users] REMD with 'bad contacts' error Justin A. Lemkul
[gmx-users] Questions about GB parameters Justin A. Lemkul
[gmx-users] make a new bond in VERSION 4.5.4 Justin A. Lemkul
[gmx-users] Questions about GB parameters Justin A. Lemkul
[gmx-users] Simulation of Primed DNA Justin A. Lemkul
[gmx-users] Re: Spikes in Backbone RMSD Justin A. Lemkul
[gmx-users] Simulation of Primed DNA-rtp entry and Terminal residue Justin A. Lemkul
[gmx-users] Re: Hexamer problem Justin A. Lemkul
[gmx-users] Re: free energy calculations Justin A. Lemkul
[gmx-users] Labeled protein Justin A. Lemkul
[gmx-users] placing dihedral constraints Justin A. Lemkul
[gmx-users] Ion distribution around Cl fix Justin A. Lemkul
[gmx-users] g_msd bug Justin A. Lemkul
[gmx-users] Re: Hexamer problem/ high and low salt solutions. Justin A. Lemkul
[gmx-users] want to remove H5T entry form HDB file / open terminal (P, O) for polymerization of i-motif Justin A. Lemkul
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides Justin A. Lemkul
[gmx-users] residue SASA Justin A. Lemkul
[gmx-users] residue SASA Justin A. Lemkul
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides Justin A. Lemkul
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides Justin A. Lemkul
[gmx-users] Re: Using new atom types Justin A. Lemkul
[gmx-users] Re: Using new atom types Justin A. Lemkul
[gmx-users] want to remove H5T entry form HDB file / open terminal (P, O) for polymerization of i-motif Justin A. Lemkul
[gmx-users] Labeled protein Justin A. Lemkul
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides Justin A. Lemkul
[gmx-users] Re: The N and C termini of peptides Justin A. Lemkul
[gmx-users] g_cluster changing traj.trr file to traj.trr.tpr Justin A. Lemkul
[gmx-users] gcluster- Error: too many iterations in routine JACOBI Justin A. Lemkul
[gmx-users] dodecahedron, octahedron box Justin A. Lemkul
[gmx-users] reg g_morph Justin A. Lemkul
[gmx-users] reg g_morph Justin A. Lemkul
[gmx-users] R: Re: g_mindist on rhombic dodecahedron system Justin A. Lemkul
[gmx-users] where is water? Justin A. Lemkul
[gmx-users] Implicit solvent crashes with PD Justin A. Lemkul
[gmx-users] Good method to turn off electrostatics Justin A. Lemkul
[gmx-users] Implicit solvent crashes with PD Justin A. Lemkul
[gmx-users] Topology for nBuOH Justin A. Lemkul
[gmx-users] R:Re: R: Re: g_mindist on rhombic dodecahedron system Justin A. Lemkul
[gmx-users] Micelle Modeling Justin A. Lemkul
[gmx-users] Gromacs on IBM clusters Justin A. Lemkul
[gmx-users] Re: Good method to turn off electrostatics Justin A. Lemkul
[gmx-users] Micelle Modeling Justin A. Lemkul
[gmx-users] number of windows in PMF Justin A. Lemkul
[gmx-users] number of windows in PMF Justin A. Lemkul
[gmx-users] number of windows in PMF Justin A. Lemkul
[gmx-users] number of windows in PMF Justin A. Lemkul
[gmx-users] residence time calculation Justin A. Lemkul
[gmx-users] extending PMF Justin A. Lemkul
Res: [gmx-users] Topology for nBuOH Justin A. Lemkul
[gmx-users] reg explicit and implicit solvent model Justin A. Lemkul
Res: Res: [gmx-users] Topology for nBuOH Justin A. Lemkul
[gmx-users] Adding Ions Justin A. Lemkul
[gmx-users] reg electrostatics Justin A. Lemkul
[gmx-users] Adding Ions Justin A. Lemkul
[gmx-users] Adding Ions Justin A. Lemkul
[gmx-users] Adding Ions Justin A. Lemkul
[gmx-users] Segmentation fault Justin A. Lemkul
[gmx-users] Re: Adding Ions Justin A. Lemkul
[gmx-users] Re: Adding Ions Justin A. Lemkul
[gmx-users] Re: Adding Ions Justin A. Lemkul
[gmx-users] Slab Ewald test Justin A. Lemkul
[gmx-users] Recommended parameters for NVE simulation of SPCE water Justin A. Lemkul
[gmx-users] Re: Adding Ions Justin A. Lemkul
[gmx-users] maintained an Hbond using a distance restraint Justin A. Lemkul
[gmx-users] maintained an Hbond using a distance restraint Justin A. Lemkul
[gmx-users] Re: [gmx-developers] implicit solvent Justin A. Lemkul
[gmx-users] Weird problem Justin A. Lemkul
[gmx-users] Replicate Triclinic Bilayer Justin A. Lemkul
[gmx-users] g_dist with multiple chains of molecules Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] Reorder of residues and atoms Justin A. Lemkul
[gmx-users] reg SMD and h-bonding Justin A. Lemkul
[gmx-users] Poisson-Boltzmann free energy in gromacs? Justin A. Lemkul
[gmx-users] Poisson-Boltzmann free energy in gromacs? Justin A. Lemkul
[gmx-users] PDB2GMX :There are 0 donors and 0 acceptors Justin A. Lemkul
[gmx-users] applying harmonic restraint Justin A. Lemkul
[gmx-users] simulation of oligomers/monomers Justin A. Lemkul
[gmx-users] gromacs 4.0 vs 4.5 Justin A. Lemkul
[gmx-users] mpirun and no pbc Justin A. Lemkul
[gmx-users] inflate gro Justin A. Lemkul
[gmx-users] regarding missing atom Justin A. Lemkul
[gmx-users] protein mass center Justin A. Lemkul
[gmx-users] Concatenating two trajectories Justin A. Lemkul
[gmx-users] Re: ProDRG error Justin A. Lemkul
[gmx-users] zn finger simulation Justin A. Lemkul
[gmx-users] Concatenating two trajectories Justin A. Lemkul
[gmx-users] compiling 4.0.7 md run to Gromacs 4.5.3 Justin A. Lemkul
[gmx-users] compiling 4.0.7 md run to Gromacs 4.5.3 Justin A. Lemkul
[gmx-users] About -chainsep and -ter Justin A. Lemkul
[gmx-users] branched polyhistidine chain Justin A. Lemkul
[gmx-users] Questions about itp files Justin A. Lemkul
[gmx-users] protein simulation w/ urea + water Justin A. Lemkul
[gmx-users] Re: Polarizable water model Justin A. Lemkul
[gmx-users] Re: inflate gro Justin A. Lemkul
[gmx-users] About -chainsep and -ter Justin A. Lemkul
[gmx-users] multiple molecule interaction Justin A. Lemkul
[gmx-users] About -chainsep and -ter Justin A. Lemkul
[gmx-users] Velocity generation Justin A. Lemkul
[gmx-users] About -chainsep and -ter Justin A. Lemkul
[gmx-users] About -chainsep and -ter Justin A. Lemkul
[gmx-users] large error bars in PMF Justin A. Lemkul
[gmx-users] large error bars in PMF Justin A. Lemkul
[gmx-users] large error bars in PMF Justin A. Lemkul
FW: [gmx-users] large error bars in PMF Justin A. Lemkul
[gmx-users] large error bars in PMF Justin A. Lemkul
[gmx-users] ngmx Justin A. Lemkul
[gmx-users] large error bars in PMF Justin A. Lemkul
[gmx-users] large error bars in PMF Justin A. Lemkul
[gmx-users] Simulation a labeled protein Justin A. Lemkul
[gmx-users] Simulation a labeled protein Justin A. Lemkul
[gmx-users] PS_PC system Justin A. Lemkul
[gmx-users] problem with fullerene simulations Justin A. Lemkul
[gmx-users] problem with fullerene simulations Justin A. Lemkul
[gmx-users] concatenate md files Justin A. Lemkul
[gmx-users] Micelle Modeling Justin A. Lemkul
[gmx-users] Single long simulation versus multiple short ones Justin A. Lemkul
[gmx-users] water box size from output files Justin A. Lemkul
[gmx-users] How to read XTC file in fortran code Justin A. Lemkul
[gmx-users] genbox -shell Justin A. Lemkul
[gmx-users] g_velacc Justin A. Lemkul
[gmx-users] Use of non-standard CHARMM27 forcefield in Gromacs - how? Justin A. Lemkul
[gmx-users] multiple protein interaction Justin A. Lemkul
[gmx-users] OPLS for group -N=CH2 Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] Micelle Modeling Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] Micelle Modeling Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] vdW cutoff Justin A. Lemkul
[gmx-users] to find out number of solvent molecules within certain radius of the protein Justin A. Lemkul
[gmx-users] (no subject) Justin A. Lemkul
[gmx-users] On computing entropies using g_anaeig Justin A. Lemkul
[gmx-users] to find out number of solvent molecules within certain radius of the protein Justin A. Lemkul
[gmx-users] How to exert different lateral pressure profile of a membrane to study its influence on a protein inserted in the double layer membrane? Justin A. Lemkul
[gmx-users] Re: How to exert different lateral pressure profile of a membrane to study its influence on a protein inserted in the double layer membrane? Justin A. Lemkul
[gmx-users] understanding the output of REMD Justin A. Lemkul
[gmx-users] How to examine the problem of one atom during EM Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] How to examine the problem of one atom during EM Justin A. Lemkul
[gmx-users] How to examine the problem of one atom during EM Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] Extracting .gro file from a crashed run Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] genconf and bonded interactions Justin A. Lemkul
[gmx-users] Improving Energy Conservation in NVE Simulation of Water Justin A. Lemkul
[gmx-users] understanding the output of REMD Justin A. Lemkul
[gmx-users] understanding the output of REMD Justin A. Lemkul
[gmx-users] disulfide bond, molecule type Justin A. Lemkul
[gmx-users] disulfide bond, molecule type Justin A. Lemkul
[gmx-users] disulfide bond, molecule type Justin A. Lemkul
[gmx-users] disulfide bond, molecule type Justin A. Lemkul
[gmx-users] Implicit Water Simulation Justin A. Lemkul
[gmx-users] Re: multiple protein interaction Justin A. Lemkul
[gmx-users] Fatal error: file type out of range (48) Justin A. Lemkul
[gmx-users] disulfide bond, molecule type Justin A. Lemkul
[gmx-users] Re: local pressure v4.5 issues Justin A. Lemkul
[gmx-users] limit in reducing time step for integration Justin A. Lemkul
[gmx-users] Re: Improving Energy Conservation in NVE Simulation of Water Justin A. Lemkul
[gmx-users] zero charge model- simulation time Justin A. Lemkul
[gmx-users] zero charge model- simulation time Justin A. Lemkul
[gmx-users] ignore H-bond Justin A. Lemkul
[gmx-users] minor trjconv issue Justin A. Lemkul
[gmx-users] zero charge model- simulation time Justin A. Lemkul
[gmx-users] limit in reducing time step for integration Justin A. Lemkul
[gmx-users] need help with topology file Justin A. Lemkul
[gmx-users] zero charge model- simulation time Justin A. Lemkul
[gmx-users] Re: hi Gromacs error Justin A. Lemkul
[gmx-users] Re: hi Gromacs error Justin A. Lemkul
[gmx-users] zero charge model- simulation time Justin A. Lemkul
[gmx-users] Arginine_Hydrochloride topology Justin A. Lemkul
[gmx-users] re-equilbrating membrane protein system after g_membed and ligand addition Justin A. Lemkul
[gmx-users] trjconv problem for two groups Justin A. Lemkul
[gmx-users] PRODRG tools Justin A. Lemkul
[gmx-users] umbrella sampling Justin A. Lemkul
[gmx-users] cannot open file Justin A. Lemkul
[gmx-users] citation Justin A. Lemkul
[gmx-users] OPLSAA parameters Justin A. Lemkul
[gmx-users] distance and angle cutoff for hydrogen bond Justin A. Lemkul
[gmx-users] calculate potential in the box contain ions Justin A. Lemkul
[gmx-users] query on Free energy perturbation Justin A. Lemkul
[gmx-users] protein in membrane Justin A. Lemkul
[gmx-users] calculate potential in the box contain ions Justin A. Lemkul
[gmx-users] Choosing more PMF-windows Justin A. Lemkul
[gmx-users] Choosing more PMF-windows Justin A. Lemkul
[gmx-users] Re: local pressure v4.5 issues Jianguo Li
[gmx-users] Re: local pressure v4.5 issues Jianguo Li
[gmx-users] Energy-groups? Jianguo Li
[gmx-users] REMD with 'bad contacts' error Jianguo Li
[gmx-users] How to exert different lateral pressure profile of a membrane to study its influence on a protein inserted in the double layer membrane? Jianguo Li
[gmx-users] Re: local pressure v4.5 issues Jianguo Li
[gmx-users] Re: local pressure v4.5 issues Jianguo Li
[gmx-users] limit in reducing time step for integration María Paula Longinotti
[gmx-users] limit in reducing time step for integration María Paula Longinotti
[gmx-users] On computing entropies using g_anaeig Hari Shankar M
[gmx-users] Gromacs on IBM clusters Kavyashree M
[gmx-users] Gromacs on IBM clusters Kavyashree M
[gmx-users] simulation of oligomers/monomers Kavyashree M
[gmx-users] simulation of oligomers/monomers Kavyashree M
[gmx-users] simulation of oligomers/monomers Kavyashree M
[gmx-users] Replica exchange and wham Sanku M
[gmx-users] residence time calculation Sanku M
[gmx-users] residence time calculation Sanku M
[gmx-users] XTC I/O error in replica exchange Sanku M
[gmx-users] g_dist with multiple chains of molecules Sanku M
[gmx-users] Poisson-Boltzmann free energy in gromacs? Sanku M
[gmx-users] Poisson-Boltzmann free energy in gromacs? Sanku M
[gmx-users] How to read XTC file in fortran code Sanku M
[gmx-users] query on Free energy perturbation Sanku M
[gmx-users] calcium parameters Mahnam
[gmx-users] g_mindist on rhombic dodecahedron system Anna Marabotti
[gmx-users] R: g_mindist on rhombic dodecahedron system Anna Marabotti
[gmx-users] Re: g_mindist on rhombic dodecahedron system Anna Marabotti
[gmx-users] Re: Re: g_mindist on rhombic dodecahedron system Anna Marabotti
[gmx-users] R: Re: g_mindist on rhombic dodecahedron system Anna Marabotti
[gmx-users] R:Re: R: Re: g_mindist on rhombic dodecahedron system Anna Marabotti
[gmx-users] rhombic dodecahedron and g_sas Anna Marabotti
[gmx-users] R: Re: rhombic dodecahedron and g_sas Anna Marabotti
[gmx-users] g_cluster error in rhombic dodecahedric system Anna Marabotti
[gmx-users] R: Re: g_cluster error in rhombic dodecahedric system (Mark Abraham) Anna Marabotti
[gmx-users] R: R: Re: g_cluster error in rhombic dodecahedric system Anna Marabotti
[gmx-users] Re: ProDRG error Parthiban Marimuthu
[gmx-users] Water-Mediated Hydrogen Bonds Erik Marklund
[gmx-users] water box size from output files Igor Marques
[gmx-users] Slab Ewald test Alex Marshall
[gmx-users] Dimensionless units question Alex Marshall
[gmx-users] Dimensionless units question Alex Marshall
[gmx-users] Dimensionless units question Alex Marshall
[gmx-users] coiled coil unfolding Marzinek, Jan
[gmx-users] SAS of ligands Marzinek, Jan
[gmx-users] SAS of ligands Marzinek, Jan
[gmx-users] SAS of ligands Marzinek, Jan
[gmx-users] EM - Starting point on the hypersurface Marzinek, Jan
[gmx-users] 3rd neighbor Otto Master
[gmx-users] Parameters for DMPG and G53a6 force field Krzysztof Mlynarczyk
[gmx-users] Solute potential energy Francesco Musiani
[gmx-users] isothermal compressibility- OPLSAA at high pressure Juliette N.
[gmx-users] Velocity generation Juliette N.
[gmx-users] zero charge model- simulation time Juliette N.
[gmx-users] zero charge model- simulation time Juliette N.
[gmx-users] zero charge model- simulation time Juliette N.
[gmx-users] zero charge model- simulation time Juliette N.
[gmx-users] zero charge model- simulation time Juliette N.
[gmx-users] Simulation a labeled protein Faezeh Nami
[gmx-users] Simulation a labeled protein Faezeh Nami
[gmx-users] Simulation a labeled protein Faezeh Nami
[gmx-users] Polarizable water model Alex [comcon1] Nesterenko
[gmx-users] Re: Polarizable water model Alex [comcon1] Nesterenko
[gmx-users] Water-Mediated Hydrogen Bonds Francesco Oteri
[gmx-users] Poisson-Boltzmann free energy in gromacs? Francesco Oteri
[gmx-users] Water-Mediated Hydrogen Bonds Raja Pandian
[gmx-users] Residence time and trjorder XAvier Periole
[gmx-users] Residence time and trjorder XAvier Periole
[gmx-users] GPUs and umbrella sampling XAvier Periole
[gmx-users] large error bars in PMF XAvier Periole
[gmx-users] large error bars in PMF XAvier Periole
[gmx-users] Fwd: density error bars XAvier Periole
[gmx-users] PhD-position at the Institute for Physical and Theoretical Chemistry (IPTC) at Regensburg University, Germany Emanuel Peter
[gmx-users] GPUs and umbrella sampling Guido Polles
[gmx-users] Gromacs compilation on AMD multicore Szilárd Páll
[gmx-users] Installation of gromacs-gpu on windows Szilárd Páll
[gmx-users] Installation of gromacs-gpu on windows Szilárd Páll
[gmx-users] Re: [gmx-developers] GPU Szilárd Páll
[gmx-users] Residence time and trjorder Baofu Qiao
[gmx-users] Connecting sidechains in gromacs file Baofu Qiao
[gmx-users] On multi-core PCs and gromacs installation Mr Bernard Ramos
[gmx-users] On multi-core PCs and gromacs installation Mr Bernard Ramos
[gmx-users] placing dihedral constraints Mr Bernard Ramos
[gmx-users] placing dihedral constraints Mr Bernard Ramos
[gmx-users] Bond force constant for GROMOS Rausch, Felix
AW: [gmx-users] Bond force constant for GROMOS Rausch, Felix
[gmx-users] Gromacs Topologies André Assunção S. T. Ribeiro
[gmx-users] (no subject) KS Rotondi
[gmx-users] micelle clustering sulatha M. S
[gmx-users] micelle clustering sulatha M. S
[gmx-users] zn finger simulation DAVID DE SANCHO
[gmx-users] Connecting sidechains in gromacs file Zack Scholl
[gmx-users] Re: Connecting sidechains in gromacs file Zack Scholl
[gmx-users] multiple molecule interaction smriti Sebastian
[gmx-users] multiple protein interaction smriti Sebastian
[gmx-users] Re: multiple protein interaction smriti Sebastian
[gmx-users] (no subject) Seibold, Stephen
[gmx-users] trjconv problem for two groups Liu Shiyong
[gmx-users] PRODRG tools Liu Shiyong
[gmx-users] Gromacs compilation on AMD multicore Alexey Shvetsov
[gmx-users] Simulation of Primed DNA Singh
[gmx-users] Simulation of Primed DNA-rtp entry and Terminal residue Singh
[gmx-users] want to remove H5T entry form HDB file / open terminal (P, O) for polymerization of i-motif Singh
[gmx-users] g_msd bug Sławomir Stachura
[gmx-users] Fluctuation from mean position in one direction Sławomir Stachura
[gmx-users] Fluctuation from mean position in one direction Sławomir Stachura
[gmx-users] Viscosity measurements Mikhail Stukan
[gmx-users] Choosing more PMF-windows Shay Teaching
[gmx-users] Re: Choosing more PMF-windows Shay Teaching
[gmx-users] Choosing more PMF-windows Shay Teaching
[gmx-users] Choosing more PMF-windows Shay Teaching
[gmx-users] N-terminus problem Emine Deniz Tekin
[gmx-users] N-terminus problem Emine Deniz Tekin
[gmx-users] non-interactive script help Terry
[gmx-users] Question about Electrostatic field in Gromacs Tom
[gmx-users] External Electric field in Gromacs Tom
[gmx-users] water box size from output files Rabab Toubar
[gmx-users] water box size from output files Rabab Toubar
[gmx-users] On multi-core PCs and gromacs installation Mirco Wahab
[gmx-users] umbrella sampling Qian Wang
[gmx-users] umbrella sampling Qian Wang
[gmx-users] umbrella sampling Qian Wang
[gmx-users] micelle clustering Tsjerk Wassenaar
[gmx-users] R: g_mindist on rhombic dodecahedron system Tsjerk Wassenaar
[gmx-users] calcium parameters Tsjerk Wassenaar
[gmx-users] rhombic dodecahedron and g_sas Tsjerk Wassenaar
[gmx-users] R: Re: rhombic dodecahedron and g_sas Tsjerk Wassenaar
[gmx-users] R: Re: g_cluster error in rhombic dodecahedric system (Mark Abraham) Tsjerk Wassenaar
[gmx-users] Single long simulation versus multiple short ones Tsjerk Wassenaar
[gmx-users] Replicate Triclinic Bilayer Max Watson
[gmx-users] Reshape triclinic box to rectangular using trjconv? Max Watson
[gmx-users] How to exert different lateral pressure profile of a membrane to study its influence on a protein inserted in the double layer membrane? KONG Xian
[gmx-users] Re: How to exert different lateral pressure profile of a membrane to study its influence on a protein inserted in the double layer membrane? KONG Xian
[gmx-users] re: How to exert different lateral pressure profile of a lipid membrane KONG Xian
[gmx-users] problems about number of frames in the edr file Zhuyi Xue
[gmx-users] problems about number of frames in the edr file Zhuyi Xue
[gmx-users] Representing bond coupling function form in a flexible water model WU Yanbin
[gmx-users] Mopac/Gmx QMMM Yao Yao
[gmx-users] QMMM Semi-empirical Error Yao Yao
[gmx-users] Fw: QMMM Semi-empirical Error Yao Yao
[gmx-users] free energy calculations Ragothaman Yennamalli
[gmx-users] Re: free energy calculations Ragothaman Yennamalli
[gmx-users] free energy Ragothaman Yennamalli
[gmx-users] where is water? Ragothaman Yennamalli
[gmx-users] where is water? Ragothaman Yennamalli
[gmx-users] simulation of oligomers/monomers Ragothaman Yennamalli
[gmx-users] simulation of oligomers/monomers Ragothaman Yennamalli
[gmx-users] Conversion of the GLYCAM dihedral parameters in the GROMACS format. Austin B. Yongye
[gmx-users] Conversion of the GLYCAM dihedral parameters in the GROMACS format. Austin B. Yongye
[gmx-users] Use of non-standard CHARMM27 forcefield in Gromacs - how? Jernej Zidar
[gmx-users] Gromacs compilation on AMD multicore Matthew Zwier
[gmx-users] Gromacs compilation on AMD multicore Matthew Zwier
[gmx-users] g_msd bug Matthew Zwier
[gmx-users] XTC I/O error in replica exchange Matthew Zwier
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] (no subject) Sara baretller
[gmx-users] help on mdrun raghuvir at bcpindia.org
[gmx-users] Labeled protein shiva birgani
[gmx-users] Labeled protein shiva birgani
[gmx-users] regarding missing atom subramaniam boopathi
[gmx-users] Position restraint code , where ? chicago.ecnu
[gmx-users] Position restraint code , where ? chicago.ecnu
[gmx-users] Gromacs adds much more water than tleap in Amber when solvate ? chicago.ecnu
[gmx-users] PRODRG tools jorge_quintero at ciencias.uis.edu.co
Re: Re: [gmx-users] How to examine the problem of one atom during EM wibke.sudholt at cloudbroker.com
Re: [gmx-users] Viscosity units wibke.sudholt at cloudbroker.com
Re: Re: [gmx-users] zero charge model- simulation time wibke.sudholt at cloudbroker.com
Re: [gmx-users] umbrella sampling wibke.sudholt at cloudbroker.com
Re: [gmx-users] protein in membrane wibke.sudholt at cloudbroker.com
[gmx-users] About force field for CNT and Lonsdaleite jhon michael espinosa duran
[gmx-users] applying harmonic restraint devawati dutta
[gmx-users] Hexamer problem errabah fatima ezzahra
[gmx-users] Hexamer problem errabah fatima ezzahra
[gmx-users] Hexamer problem errabah fatima ezzahra
[gmx-users] Re: Hexamer problem/ high and low salt solutions. errabah fatima ezzahra
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides errabah fatima ezzahra
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides errabah fatima ezzahra
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides errabah fatima ezzahra
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides errabah fatima ezzahra
[gmx-users] Re: Hexamer problem/ The N and C termini of peptides errabah fatima ezzahra
[gmx-users] The N and C termini of peptides errabah fatima ezzahra
[gmx-users] Adding Ions errabah fatima ezzahra
[gmx-users] Adding Ions errabah fatima ezzahra
[gmx-users] Adding Ions errabah fatima ezzahra
[gmx-users] Adding Ions errabah fatima ezzahra
[gmx-users] Re: Adding Ions errabah fatima ezzahra
[gmx-users] Re: Adding Ions errabah fatima ezzahra
[gmx-users] Re: Adding Ions errabah fatima ezzahra
[gmx-users] energygrps long-range interaction gyorgy.hantal at fc.up.pt
[gmx-users] xmgrace manoj gadhwal
[gmx-users] gnuplot manoj gadhwal
[gmx-users] angle between two domains connected at a hinge maria goranovic
[gmx-users] g_bundle -na option for calculating angle between helices maria goranovic
[gmx-users] Re: g_bundle -na option for calculating angle between helices maria goranovic
[gmx-users] General Question about Simulated Annealing santhu kumar
[gmx-users] restarting stopped mdrun Mohana lakshmi
[gmx-users] Mopac/Gmx QMMM lina
[gmx-users] help on mdrun lina
[gmx-users] restarting stopped mdrun lina
[gmx-users] Gromacs on IBM clusters lina
[gmx-users] Weird problem lina
[gmx-users] How to examine the problem of one atom during EM lina
[gmx-users] How to examine the problem of one atom during EM lina
[gmx-users] How to examine the problem of one atom during EM lina
[gmx-users] Force components on ATOM XX nahren manuel
[gmx-users] ERROR: Number of grid cells is zero udaya kiran marelli
[gmx-users] terminal_fixing balaji nagarajan
[gmx-users] energy_extract balaji nagarajan
[gmx-users] solvent_protein interaction energy balaji nagarajan
[gmx-users] interaction energy balaji nagarajan
[gmx-users] interaction energy balaji nagarajan
[gmx-users] interaction energy balaji nagarajan
[gmx-users] Mu-X balaji nagarajan
[gmx-users] final_min_step energy balaji nagarajan
[gmx-users] minimization_error balaji nagarajan
[gmx-users] free energy balaji nagarajan
[gmx-users] mpirun and no pbc shivangi nangia
[gmx-users] branched polyhistidine chain shivangi nangia
[gmx-users] genbox -shell shivangi nangia
[gmx-users] to find out number of solvent molecules within certain radius of the protein shivangi nangia
[gmx-users] to find out number of solvent molecules within certain radius of the protein shivangi nangia
[gmx-users] Extracting .gro file from a crashed run shivangi nangia
[gmx-users] pmf_calculation shahid nayeem
[gmx-users] pmf_calculation shahid nayeem
[gmx-users] Arginine_Hydrochloride topology shahid nayeem
[gmx-users] Graphene growth simulation in gromacs neclaoz
[gmx-users] regarding simulation of peptide and protein complex rashi parihar
[gmx-users] distance and angle cutoff for hydrogen bond atila petrosian
[gmx-users] monte carlo simulation in gromacs sreelakshmi ramesh
[gmx-users] understanding the output of REMD sreelakshmi ramesh
[gmx-users] understanding the output of REMD sreelakshmi ramesh
[gmx-users] understanding the output of REMD sreelakshmi ramesh
[gmx-users] Conversion of the GLYCAM dihedral parameters in the GROMACS format. sa
[gmx-users] Conversion of the GLYCAM dihedral parameters in the GROMACS format. sa
[gmx-users] Conversion of the GLYCAM dihedral parameters sa
[gmx-users] reg g_morph vidhya sankar
[gmx-users] reg g_morph vidhya sankar
[gmx-users] reg electrostatic potential vidhya sankar
[gmx-users] reg g_morph vidhya sankar
[gmx-users] reg g_morph vidhya sankar
[gmx-users] reg explicit and implicit solvent model vidhya sankar
[gmx-users] reg electrostatics vidhya sankar
[gmx-users] reg SMD and h-bonding vidhya sankar
[gmx-users] compute displacement leila separdar
[gmx-users] compute displacement leila separdar
[gmx-users] Implicit Water Simulation ifat shub
[gmx-users] which chain to select for MD simulation bipin singh
[gmx-users] which chain to select for MD simulation bipin singh
[gmx-users] Concatenating two trajectories bipin singh
[gmx-users] Concatenating two trajectories bipin singh
[gmx-users] Concatenating two trajectories bipin singh
[gmx-users] Re: gmx-users Digest, Vol 87, Issue 44 raghav singh
[gmx-users] want to remove H5T entry form HDB file / open terminal (P, O) for polymerization of i-motif raghav singh
[gmx-users] want to remove H5T entry form HDB file / open terminal (P, O) for polymerization of i-motif raghav singh
[gmx-users] gnuplot andrea spitaleri
[gmx-users] angle between two domains connected at a hinge andrea spitaleri
[gmx-users] problem with fullerene simulations jampani srinivas
[gmx-users] problem with fullerene simulations jampani srinivas
[gmx-users] problem with fullerene simulations jampani srinivas
[gmx-users] need help with topology file jampani srinivas
[gmx-users] Requiring to post message s1460007 at st.kmutt.ac.th
[gmx-users] which chain to select for MD simulation felmerino at uchile.cl
[gmx-users] OPLS for group -N=CH2 bhf70 at udsu.ru
[gmx-users] Voronoi tessellation francesca.stanzione at unina.it
[gmx-users] large error bars in PMF chris.neale at utoronto.ca
[gmx-users] large error bars in PMF chris.neale at utoronto.ca
[gmx-users] umbrella sampling chris.neale at utoronto.ca
[gmx-users] umbrella sampling chris.neale at utoronto.ca
[gmx-users] g_dipoles -slab option will wang
[gmx-users] Reorder of residues and atoms xiaowu759
[gmx-users] g_mindist ahmet yıldırım
[gmx-users] g_mindist ahmet yıldırım
[gmx-users] g_sas calculation ahmet yıldırım
[gmx-users] g_sas calculation ahmet yıldırım
[gmx-users] residue SASA ahmet yıldırım
[gmx-users] residue SASA ahmet yıldırım
[gmx-users] PDB2GMX :There are 0 donors and 0 acceptors ÏéÇ« ¿×
[gmx-users] PDB2GMX :There are 0 donors and 0 acceptors ÏéÇ« ¿×
[gmx-users] Installation of gromacs-gpu on windows Андрей Гончар
[gmx-users] Installation of gromacs-gpu on windows Андрей Гончар
[gmx-users] Installation of gromacs-gpu on windows Андрей Гончар
[gmx-users] shift functions in gromacs Павел Кудрявцев
[gmx-users] compiling 4.0.7 md run to Gromacs 4.5.3 גדעון לפידות
[gmx-users] help 晓英
[gmx-users] PME energy calculation 李浩

Last message date: Sun Jul 31 18:12:44 CEST 2011
Archived on: Thu Nov 14 12:11:20 CET 2013

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