[gmx-users] where is water?

Ragothaman Yennamalli ragothaman at gmail.com
Mon Jul 11 18:33:23 CEST 2011


Hi Friends,

When I run pdb2gmx, it automatically asks which water topology should be
included. Also, in the .top file the lines included are:

; Include water topology
#include "gromos53a6.ff/spc.itp"

However, I do not see any water molecules in the .gro file. So, was water
included or not?

Thanks and Regards,
Raghu
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