[gmx-users] Connecting sidechains in gromacs file

Zack Scholl zns at duke.edu
Fri Jul 15 11:34:03 CEST 2011

Hi all -

I'm running a simulation that has an implicit solvent.  I ran my
simulation and it seems that everything not connected to the backbone
has floated off into space.  Is there a way to define connections so
that side chains stay connected?  Has anyone had this problem before?


Zack Scholl

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