[gmx-users] Fluctuation from mean position in one direction

[Sławomir Stachura]

Hi Mark,
Thank you for your quick reply. So it seems that I have to do it on my own. It's always good to ask  - it's not productive to reinvent the wheel.
Best wishes,
     Slawomir




Wiadomość napisana przez Mark Abraham w dniu 2011-07-19, o godz. 07:28:

> On 19/07/2011 12:16 PM, Sławomir Stachura wrote:
>> Hi GMX-Users,
>> I am analysing my POPC membrane simulation and I want to calculate average fluctuation from mean postion of POPC lipids in perpendicular direction to membrane surface (Z-direction) to grasp that kind of motion. I've searched through mailing list and manual, but couldn't find any solution. Maybe someone has an idea how to achieve that? I'd be grateful for any help.
> 
> Since there exists no shrink-wrapped solution, you'll have to develop one. Express mathematically what you want to observe, and then consider how g_traj and g_analyze might be used to achieve it.
> 
> Mark
> -- 
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

Sławomir Stachura
Centre de Biophysique Moléculaire, CNRS
Rue Charles Sadron
45071 Orléans CEDEX 2
France

E-Mail : slawomir.stachura at cnrs-orleans.fr
E-Mail : stachura.slawomir at gmail.com
URL : http://dirac.cnrs-orleans.fr 

Synchrotron SOLEIL - Division Expériences
Saint Aubin - BP 48
91192 Gif-sur-Yvette CEDEX
France

Tel : +33 (0)1 69 35 97 51





-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110719/12838703/attachment.html>