[gmx-users] branched polyhistidine chain

[Justin A. Lemkul]

shivangi nangia wrote:
> Hi gmx-users,
> 
> 
> Is there a way to create a branched polyhistidine  chain using gromacs, 
> instead of a straight chain?
> 
> 

There is limited support for branched chains via pdb2gmx.  The only way to 
introduce a branch point is by using specbond.dat.

http://www.gromacs.org/Documentation/File_Formats/specbond.dat

-Justin

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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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