[gmx-users] g_confrms and superimposed structures

leila karami karami.leila1 at gmail.com
Mon Jun 13 14:12:48 CEST 2011


Dear Justin

very thanks for your reply

as you said I have two choices : 1) copy and paste the two models into
separate .pdb files.

2) trjconv -sep .no matter which one I choose. the result is the same.
because vmd don't open two separate pdb files?

is there another way to have 2 structures simultaneously in one figure? (my
goal is superposition of averaged md structure and x-ray structure)



-- 

Leila Karami
Ph.D. student of Physical Chemistry
K.N. Toosi University of Technology
Theoretical Physical Chemistry Group
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