[gmx-users] g_confrms and superimposed structures

leila karami karami.leila1 at gmail.com
Mon Jun 13 14:59:18 CEST 2011


Dear Justin

Thanks for your attention

My problem was solved.

I have a new question. as I said my goal is superposition of averaged md
structure and x-ray structure.

My simulation is 5 ns. How to obtain the MD structure average for the period
1.5–5 ns? what command?


-- 

Leila Karami
Ph.D. student of Physical Chemistry
K.N. Toosi University of Technology
Theoretical Physical Chemistry Group
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