[gmx-users] cross correlations

[E. Nihal Korkmaz]

Dear all,

Is there any built in function that gives me the pairwise correlation of the
fluctuation (unit vector between two coordinates of a residue) of residues
(averaged over the input trajectory). I tried g_covar but that's not what
i'm looking for. The result I want should be an NxN matrix with values
ranging from -1 to 1.

Thanks in advance,
Nihal

-- 
Elif Nihal Korkmaz

Research Assistant
University of Wisconsin - Biophysics
Member of Qiang Cui & Thomas Record Labs
1101 University Ave, Rm. 8359
Madison, WI 53706
Phone:  608-265-3644
Email:   korkmaz at wisc.edu
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