[gmx-users] g_membed tool

[Mohana lakshmi]

Dear all..

I am using g_membed tools to embed the protein into lipid membrane. I read that before doing g_membed we need to run a short run with some options in .mdp files. 
what are the steps do we need to do before g_membed. It is given that box size should be taken from the membrane strucuture file but i don t know how and where to mention the size?
Whether any tutorial is available for transmembrane protein using g_membed tool?

Thank you

Mohanalakshmi N.


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