[gmx-users] no output dgdl file
Emanuel Birru
Emanuel.Birru at monash.edu
Thu Mar 24 01:29:21 CET 2011
Hi,
Your foreign_lambda value is only one, please put all your lambda values
separated by space and you will get the dhdl file. And make sure that
you use -deffnm when you run your mdrun to get all the out put files by
default.
Cheers,
From: gmx-users-bounces at gromacs.org
[mailto:gmx-users-bounces at gromacs.org] On Behalf Of Moeed
Sent: Thursday, 24 March 2011 4:13 AM
To: gmx-users at gromacs.org
Subject: [gmx-users] no output dgdl file
Hello,
I have a little problem with FE output file. Below is the settings and
also I am including -dgdl in the command I issue but no dgdl (or dhdl)
file generates. I dont figure where the problem lies ! (version 4.5.3).
free_energy = yes
init_lambda = 0
delta_lambda = 0
sc_alpha = 0.5
sc-power = 1
sc_sigma = 0.3
foreign_lambda = 0.1
dhdl_derivatives = yes
couple-moltype = Polymer
couple-lambda0 = vdw-q
couple-lambda1 = none
couple-intramol = yes
nstdhdl = 10
separate_dhdl_file = yes
dh_hist_size = 0
dh_hist_spacing = 0.1
Best
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20110324/bcf3a92f/attachment.html>
More information about the gromacs.org_gmx-users
mailing list