[gmx-users] "Command Not Found"

Justin A. Lemkul jalemkul at vt.edu
Mon May 16 16:56:58 CEST 2011

Natalie Stephenson wrote:
>  Hi All,
> Sorry to bug you all about this - it's been mentioned a few times but I 
> can't find an answer that seems to relate to the situation I've got.
> I'm trying to use the g_fdaconv / g_fdatools within gromacs 4.0.5, 
> however, everytime I type the commands I get 'g_fda*: command not found'.

Using wildcards will not find command names.

> These are present in the /usr/local/gromacs/bin directory - however when 
> I've checked over the config.log they haven't installed.  I'm not sure I 

OK, so you have an executable installed, but it didn't install?  Can you please 
clarify?  Neither g_fdaconv or g_fdatools are standard Gromacs utilities - are 
they some sort of external package or add-on?


> understand what's happened - the installation was done by downloading 
> followed by ./configure, make, make install, and everything else seems 
> to be functioning fine.  What is it I've missed?
> Can anyone shed any light on my (probably completely stupid) problem?!
> Thanks loads,
> Natalie
> ------------------------------------------------
> Natalie Stephenson, B.Sc
> PhD Research Associate
> Manchester Interdisciplinary Biocentre
> 131 Princess Street
> Manchester
> M1 7DN
> x65816
> ------------------------------------------------


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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