[gmx-users] average trajectory

Yulian Gavrilov zzeppelin87 at gmail.com
Thu May 19 14:09:05 CEST 2011

Dear gromacs users,
1. I have got 3 MD-outputs for the same protein (3 runnings for 100 ns).
I want to make a distance matrix (*g_mdmat*) for the average trajectory of
these 3 runnings.
*g_mdmat* gives an average  matrix for one trajectory, but I want to get it
for the average trajectory.
I tried to use *xpm2ps* to get average matrix, but in it I can only combine
matrices (not to take an average matrix).
Can I get an average matrix, or an average trajectory?


Yulian Gavrilov
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