[gmx-users] Gromacs query for vaccum medium

Mark Abraham Mark.Abraham at anu.edu.au
Thu Nov 3 19:13:06 CET 2011

On 4/11/2011 4:58 AM, Anushree Tripathi wrote:
> Let me know how to simulate a membrane protein in vaccum medium by 
> using gromacs commands.What are the basic differences in commands as 
> well as parameters used in liquid and vaccum medium? Please guide me.

I suggest you do all the GROMACS tutorial material you can find, and 
supplement that with reading several published articles that do 
simulations with objectives similar to yours.


More information about the gromacs.org_gmx-users mailing list