[gmx-users] Rv: g_helixorient question

Javier Romero Garcia kurcolove at yahoo.com
Tue Nov 22 12:41:37 CET 2011

Hi, I'm sorry to insist in my question but if somebody could answer or just to send me some information or place to look for, I will be very thanked.

GROMACS manual does not give any information but the way to use it. Nothing about the contain of files.

Thanks again. 

----- Mensaje reenviado -----
De: Javier Romero Garcia <kurcolove at yahoo.com>
Para: "gmx-users at gromacs.org" <gmx-users at gromacs.org> 
Enviado: lunes 21 de noviembre de 2011 10:44
Asunto: g_helixorient question

Hello! My name's Javier Romero and I am a PhD student, writting from Barcelona. I am simulating an anphipatic helix of 23 residues, in the interface of a DPPC membrane and water. I am trying to measure the rotation of the helix using the tool "g_helixorient".

Could be somebody so kind to explain me the meaning of each kind of the files? I mean:

- Twist.
- Tilt.
- Tetha.
- Rotation.
- Rise.
- Radius.
- Helixaxis.
- Center.
- Bending.

Thanks in advance.
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